Changes in global fluvial sediment concentrations and fluxes between 1985 and 2020
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Sediment resuspension in muddy sediments enhances pyrite oxidation and carbon dioxide emissions in Kiel Bight
Sediment resuspension of blue carbon ecosystems (e.g., seagrass beds) and muddy sediments exposes buried particulate organic carbon to oxygenated waters and remineralization, potentially enhancing carbon dioxide fluxes. However, the kinetics of carbon degradation under oxic and anoxic conditions are poorly constrained. We report the results of incubation experiments with sediments from Kiel Bight to simulate sediment resuspension events induced by natural and anthropogenic resuspension in this area. A numerical model determined that oxic carbon remineralization rates were up to two-fold higher than those under anoxic conditions. A coupled sediment-water column model demonstrated that pyrite oxidation, rather than carbon oxidation, has the potential to induce large carbon dioxide emissions to the atmosphere following anthropogenic sediment disturbance by trawling. Upscaling to muddy areas of Kiel Bight suggests an annual emission of up to ~14 k tonnes of carbon dioxide per year. Pyrite oxidation may contribute to a weakening of the carbon shelf pump and a reduction of anthropogenic carbon dioxide uptake.
Ocean-bottom seismometers reveal surge dynamics in Earth’s longest-runout sediment flows
Turbidity currents carve Earth’s deepest canyons, form Earth’s largest sediment deposits, and break seabed telecommunications cables. Directly measuring turbidity currents is notoriously challenging due to their destructive impact on instruments within their path. This is especially the case for canyon-flushing flows that can travel >1000 km at >5 m/s, whose dynamics are poorly understood. We deployed ocean-bottom seismometers safely outside turbidity currents, and used emitted seismic signals to remotely monitor canyon-flushing events. By analyzing seismic power variations with distance and signal polarization, we distinguish signals generated by turbulence and sediment transport and document the evolving internal speed and structure of flows. Flow-fronts have dense near-bed layers comprising multiple surges with 5-to-30-minute durations, continuing for many hours. Fastest surges occur 30–60 minutes behind the flow-front, providing momentum that sustains flow-fronts for >1000 km. Our results highlight surging within dense near-bed layers as a key driver of turbidity currents’ long-distance runout.
The role of rivers in the origin and future of Amazonian biodiversity
The rich biodiversity of Amazonia is shaped geographically and ecologically by its rivers and their cycles of seasonal flooding. Anthropogenic effects, such as deforestation, infrastructure development and extreme climatic events, threaten the ecological processes sustaining Amazonian ecosystems. In this Review, we explore the coupled evolution of Amazonian rivers and biodiversity associated with terrestrial and seasonally flooded environments, integrating geological, climatic, ecological and genetic evidence. Amazonia and its fluvial environments are highly heterogeneous, and the drainage system is historically dynamic and continually evolving; as a result, the discharge, sediment load and strength of rivers as barriers to biotic dispersal has changed through time. Ecological affinities of taxa, drainage rearrangements and variations in riverine landscape caused by past climate changes have mediated the evolution of the high diversity found in modern-day Amazonia. The connected history of the region’s biodiversity and landscape provides fundamental information for mitigating current and future impacts. However, incomplete knowledge about species taxonomy, distributions, habitat use, ecological interactions and occurrence patterns limits our understanding. Partnerships with Indigenous peoples and local communities, who have close ties to land and natural resources, are key to improving knowledge generation and dissemination, enabling better impact assessments, monitoring and management of the riverine systems at risk from evolving pressures.
Distribution and genomic variation of ammonia-oxidizing archaea in abyssal and hadal surface sediments
Ammonia-oxidizing archaea of the phylum Thaumarchaeota play a central role in the biogeochemical cycling of nitrogen in benthic sediments, at the interface between pelagic and subsurface ecosystems. However, our understanding of their niche separation and of the processes controlling their population structure in hadal and abyssal surface sediments is still limited. Here, we reconstructed 47 AOA metagenome-assembled genomes (MAGs) from surface sediments of the Atacama and Kermadec trench systems. They formed deep-sea-specific groups within the family Nitrosopumilaceae and were assigned to six amoA gene-based clades. MAGs from different clades had distinct distribution patterns along oxygen-ammonium counter gradients in surface sediments. At the species level, MAGs thus seemed to form different ecotypes and follow deterministic niche-based distributions. In contrast, intraspecific population structure, defined by patterns of Single Nucleotide Variants (SNV), seemed to reflect more complex contributions of both deterministic and stochastic processes. Firstly, the bathymetric range had a strong effect on population structure, with distinct populations in abyssal plains and hadal trenches. Then, hadal populations were clearly separated by trench system, suggesting a strong isolation-by-topography effect, whereas abyssal populations were rather controlled by sediment depth or geographic distances, depending on the clade considered. Interestingly, genetic variability between samples was lowest in sediment layers where the mean MAG coverage was highest, highlighting the importance of selective pressure linked with each AOA clade’s ecological niche. Overall, our results show that deep-sea AOA genome distributions seem to follow both deterministic and stochastic processes, depending on the genomic variability scale considered.
Metabolic control analysis of biogeochemical systems
Many reactive systems involve processes operating at different scales, such as hydrodynamic transport and diffusion, abiotic chemical reactions, microbial metabolism, and population dynamics. Determining the influence of these processes on system dynamics is critical for model design and for prioritizing parameter estimation efforts. Metabolic control analysis is a framework for quantifying the role of enzymes in cellular biochemical networks, but its applicability to biogeochemical and other reactive systems remains unexplored. Here I show how the core concepts of metabolic control analysis can be generalized to much more complex reactive systems, enabling insight into the roles of physical transport, population dynamics, and chemical kinetics at organismal to planetary scales. I demonstrate the power of this framework for two systems of importance to ocean biogeochemistry: A simplified (mostly didactic) model for the sulfate methane transition zone in Black Sea sediments, and a more comprehensive model for the oxygen minimum zone in Saanich Inlet near steady state. I find that physical transport is by far the greatest rate-limiting factor for sulfate-driven methane oxidation in the first system and for fixed nitrogen loss in the second system.
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