Earth’s inner core is changing in shape as well as in rotation rate
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Twist–torsion coupling in beating axonemes
Motile cilia and flagella produce regular bending waves that enable single-cell navigation due to non-planar waveforms with characteristic torsion. However, it is not known how torsion, a geometric property of the three-dimensional waveform, relates to mechanical twist deformations of the axoneme, the conserved cytoskeletal core of cilia and flagella. Here we show that axoneme twisting and torsion are coupled and that twist waves propagate along the beating axoneme of Chlamydomonas reinhardtii algae. We resolve the three-dimensional shapes of the axonemal waveform with nanometre precision at millisecond timescales using defocused dark-field microscopy and beat-cycle averaging, observing regular hetero-chiral torsion waves propagating base to tip. To investigate whether the observed torsion results from axonemal twist, we attach gold nanoparticles to axonemes and measure their cross-section rotation during beating. We find that, locally, the axonemal cross-section co-rotates with the bending plane, evidencing twist–torsion coupling. Our results demonstrate the link between shape and mechanical deformation in beating axonemes and can inform models of the dynamics of motor proteins inside the axoneme responsible for shaping the beat of motile cilia.
MADS31 supports female germline development by repressing the post-fertilization programme in cereal ovules
The female germline of flowering plants develops within a niche of sporophytic (somatic) ovule cells, also referred to as the nucellus. How niche cells maintain their own somatic developmental programme, yet support the development of adjoining germline cells, remains largely unknown. Here we report that MADS31, a conserved MADS-box transcription factor from the B-sister subclass, is a potent regulator of niche cell identity. In barley, MADS31 is preferentially expressed in nucellar cells directly adjoining the germline, and loss-of-function mads31 mutants exhibit deformed and disorganized nucellar cells, leading to impaired germline development and partial female sterility. Remarkably similar phenotypes are observed in mads31 mutants in wheat, suggesting functional conservation within the Triticeae tribe. Molecular assays indicate that MADS31 encodes a potent transcriptional repressor, targeting genes in the ovule that are normally active in the seed. One prominent target of MADS31 is NRPD4b, a seed-expressed component of RNA polymerase IV/V that is involved in epigenetic regulation. NRPD4b is directly repressed by MADS31 in vivo and is derepressed in mads31 ovules, while overexpression of NRPD4b recapitulates the mads31 ovule phenotype. Thus, repression of NRPD4b by MADS31 is required to maintain ovule niche functionality. Our findings reveal a new mechanism by which somatic ovule tissues maintain their identity and support germline development before transitioning to the post-fertilization programme.
Crop rotation increases Tibetan barley yield and soil quality on the Tibetan Plateau
Tibetan barley (Hordeum vulgare) accounts for over 70% of the total food production in the Tibetan Plateau. However, continuous cropping of Tibetan barley causes soil degradation, reduces soil quality and causes yield decline. Here we explore the benefits of crop rotation with wheat and rape to improve crop yield and soil quality. We conducted 39 field experiments on the Tibetan Plateau, comparing short-term (≤5 years), 5–10 years and long-term (≥10 years) continuous cropping with rotation of Tibetan barley with wheat or rape. Results showed that Tibetan barley–wheat and Tibetan barley–rape rotations increased yields by 17% and 12%, respectively, while improving the soil quality index by 11% and 21%, compared with long-term continuous cropping. Both Tibetan barley rotations with wheat and rape improved soil quality and consequently yield, mainly by increasing soil microbial biomass nitrogen and microbial biomass carbon and decreasing pH. By contrast, long-term continuous cropping led to decreased soil organic matter, lower microbial biomass nitrogen and increased pH, contributing to yield decline. The benefits of rotations on crop yield and soil quality increased over time. Implementing crop rotation with wheat or rape thus offers a sustainable agricultural strategy for improving food security on the Tibetan Plateau.
Macroevolution along developmental lines of least resistance in fly wings
Evolutionary change requires genetic variation, and a reigning paradigm in biology is that rates of microevolution can be predicted from estimates of available genetic variation within populations. However, the accuracy of such predictions should decay on longer evolutionary timescales, as the influence of genetic constraints diminishes. Here we show that intrinsic developmental variability and standing genetic variation in wing shape in two distantly related flies, Drosophila melanogaster and Sepsis punctum, are aligned and predict deep divergence in the dipteran phylogeny, spanning >900 taxa and 185 million years. This alignment cannot be easily explained by constraint hypotheses unless most of the quantified standing genetic variation is associated with deleterious side effects and is effectively unusable for evolution. However, phenotyping of 71 genetic lines of S. punctum revealed no covariation between wing shape and fitness, lending no support to this hypothesis. We also find little evidence for genetic constraints on the pace of wing shape evolution along the dipteran phylogeny. Instead, correlational selection related to allometric scaling, simultaneously shaping developmental variability and deep divergence in fly wings, emerges as a potential explanation for the observed alignment. This suggests that pervasive natural selection has the potential to shape developmental architectures of some morphological characters such that their intrinsic variability predicts their long-term evolution.
Influenza A virus rapidly adapts particle shape to environmental pressures
Enveloped viruses such as influenza A virus (IAV) often produce a mixture of virion shapes, ranging from 100 nm spheres to micron-long filaments. Spherical virions use fewer resources, while filamentous virions resist cell-entry pressures such as antibodies. While shape changes are believed to require genetic adaptation, the mechanisms of how viral mutations alter shape remain unclear. Here we find that IAV dynamically adjusts its shape distribution in response to environmental pressures. We developed a quantitative flow virometry assay to measure the shape of viral particles under various infection conditions (such as multiplicity, replication inhibition and antibody treatment) while using different combinations of IAV strains and cell lines. We show that IAV rapidly tunes its shape distribution towards spheres under optimal conditions but favours filaments under attenuation. Our work demonstrates that this phenotypic flexibility allows IAV to rapidly respond to environmental pressures in a way that provides dynamic adaptation potential in changing surroundings.
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