Reconstruction of diploid higher-order human 3D genome interactions from noisy Pore-C data using Dip3D
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Personalized bioceramic grafts for craniomaxillofacial bone regeneration
The reconstruction of craniomaxillofacial bone defects remains clinically challenging. To date, autogenous grafts are considered the gold standard but present critical drawbacks. These shortcomings have driven recent research on craniomaxillofacial bone reconstruction to focus on synthetic grafts with distinct materials and fabrication techniques. Among the various fabrication methods, additive manufacturing (AM) has shown significant clinical potential. AM technologies build three-dimensional (3D) objects with personalized geometry customizable from a computer-aided design. These layer-by-layer 3D biomaterial structures can support bone formation by guiding cell migration/proliferation, osteogenesis, and angiogenesis. Additionally, these structures can be engineered to degrade concomitantly with the new bone tissue formation, making them ideal as synthetic grafts. This review delves into the key advances of bioceramic grafts/scaffolds obtained by 3D printing for personalized craniomaxillofacial bone reconstruction. In this regard, clinically relevant topics such as ceramic-based biomaterials, graft/scaffold characteristics (macro/micro-features), material extrusion-based 3D printing, and the step-by-step workflow to engineer personalized bioceramic grafts are discussed. Importantly, in vitro models are highlighted in conjunction with a thorough examination of the signaling pathways reported when investigating these bioceramics and their effect on cellular response/behavior. Lastly, we summarize the clinical potential and translation opportunities of personalized bioceramics for craniomaxillofacial bone regeneration.
A computational spectrometer for the visible, near, and mid-infrared enabled by a single-spinning film encoder
Computational spectrometers enable low-cost, in-situ, and rapid spectral analysis, with applications in chemistry, biology, and environmental science. Traditional filter-based spectral encoding approaches typically use filter arrays, complicating the manufacturing process and hindering device consistency. Here we propose a computational spectrometer spanning visible to mid-infrared by combining the Single-Spinning Film Encoder (SSFE) with a deep learning-based reconstruction algorithm. Optimization through particle swarm optimization (PSO) allows for low-correlation and high-complexity spectral responses under different polarizations and spinning angles. The spectrometer demonstrates single-peak resolutions of 0.5 nm, 2 nm, 10 nm, and dual-peak resolutions of 3 nm, 6 nm, 20 nm for the visible, near, and mid-infrared wavelength ranges. Experimentally, it shows an average MSE of 1.05 × 10⁻³ for narrowband spectral reconstruction in the visible wavelength range, with average center-wavelength and linewidth errors of 0.61 nm and 0.56 nm. Additionally, it achieves an overall 81.38% precision for the classification of 220 chemical compounds, showcasing its potential for compact, cost-effective spectroscopic solutions.
Cellpose3: one-click image restoration for improved cellular segmentation
Generalist methods for cellular segmentation have good out-of-the-box performance on a variety of image types; however, existing methods struggle for images that are degraded by noise, blurring or undersampling, all of which are common in microscopy. We focused the development of Cellpose3 on addressing these cases and here we demonstrate substantial out-of-the-box gains in segmentation and image quality for noisy, blurry and undersampled images. Unlike previous approaches that train models to restore pixel values, we trained Cellpose3 to output images that are well segmented by a generalist segmentation model, while maintaining perceptual similarity to the target images. Furthermore, we trained the restoration models on a large, varied collection of datasets, thus ensuring good generalization to user images. We provide these tools as ‘one-click’ buttons inside the graphical interface of Cellpose as well as in the Cellpose API.
Evolution of temporomandibular joint reconstruction: from autologous tissue transplantation to alloplastic joint replacement
The reconstruction of the temporomandibular joint presents a multifaceted clinical challenge in the realm of head and neck surgery, underscored by its relatively infrequent occurrence and the lack of comprehensive clinical guidelines. This review aims to elucidate the available approaches for TMJ reconstruction, with a particular emphasis on recent groundbreaking advancements. The current spectrum of TMJ reconstruction integrates diverse surgical techniques, such as costochondral grafting, coronoid process grafting, revascularized fibula transfer, transport distraction osteogenesis, and alloplastic TMJ replacement. Despite the available options, a singular, universally accepted ‘gold standard’ for reconstructive techniques or materials remains elusive in this field. Our review comprehensively summarizes the current available methods of TMJ reconstruction, focusing on both autologous and alloplastic prostheses. It delves into the differences of each surgical technique and outlines the implications of recent technological advances, such as 3D printing, which hold the promise of enhancing surgical precision and patient outcomes. This evolutionary progress aims not only to improve the immediate results of reconstruction but also to ensure the long-term health and functionality of the TMJ, thereby improving the quality of life for patients with end-stage TMJ disorders.
Solution-processable polymer membranes with hydrophilic subnanometre pores for sustainable lithium extraction
Membrane-based separation processes hold great promise for sustainable extraction of lithium from brines for the rapidly expanding electric vehicle industry and renewable energy storage. However, it remains challenging to develop high-selectivity membranes that can be upscaled for industrial processes. Here we report solution-processable polymer membranes with subnanometre pores with excellent ion separation selectivity in electrodialysis processes for lithium extraction. Polymers of intrinsic microporosity incorporated with hydrophilic functional groups enable fast transport of monovalent alkali cations (Li+, Na+ and K+) while rejecting relatively larger divalent ions such as Mg2+. The polymer of intrinsic microporosity membranes surpasses the performance of most existing membrane materials. Furthermore, the membranes were scaled up and integrated into an electrodialysis stack, demonstrating excellent selectivity in simulated salt-lake brines. This work will inspire the development of selective membranes for a wide range of sustainable separation processes critical for resource recovery and a global circular economy.
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